MLOC_44252 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.07036050.295980.1717430.187802
LEAShoots from the seedlings (10 cm shoot stage)0.20540.22402300.118862
INF1Young developing inflorescences (5mm)0.6035140.7633590.9498240.595627
INF2Developing inflorescences (1-1.5 cm)0.9000350.4958320.620550.694548
ROORoots from the seedlings (10 cm shoot stage)0.60420.1357960.3773890.265316
NODDeveloping tillers at six leaf stage, 3rd internode0.1957410.07156040.2041810.277921
CAR5Developing grain, bracts removed (5 DPA)0.7653330.8218620.8779330.744324
CAR15Developing grain, bracts removed (15 DPA)0.4531940.6124340.5784511.19237



CDS Structure of MLOC_44252






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44252.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374157NoneNoneNoneNone
MLOC_44252.1CUST_230_PI427708083AvailableAvailablecontig_274396 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g59550.1 -1 2e-44 164 84/167 (50%) 13101.m06331 protein senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed
TAIR PP10 AT2G28990.1 -1 3e-12 68 53/171 (31%) Leucine-rich repeat protein kinase family protein | chr2:12455055-12459541 FORWARD LENGTH=884