MLOC_4424 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.672968 | 0.680576 | 0.45897 | 0.659992 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0.0252314 | 0 | 0.0218195 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.146547 | 0.137474 | 0.0560928 | 0.127912 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.0991841 | 0.799387 | 0.336826 | 0.741169 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0230609 | 0.223049 | 0.702937 | 0.94824 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.11547 | 3.09212 | 4.17414 | 3.11969 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 14.2731 | 13.5717 | 13.9154 | 30.0721 |
CDS Structure of MLOC_4424
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4424.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g37800.1 |
+3 |
0.0 |
815 |
415/513 (81%) |
13108.m03989 protein CAMK_KIN1/SNF1/Nim1_like_AMPKh.4 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
| TAIR PP10 |
AT3G01090.2 |
+3 |
0.0 |
672 |
352/521 (68%) |
| Symbols: AKIN10, KIN10 | SNF1 kinase homolog 10 | chr3:31437-34143 REVERSE LENGTH=535 |
