MLOC_44235 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.118531.936261.406222.0286
LEAShoots from the seedlings (10 cm shoot stage)0.1182081.937061.7371.17546
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)26.590418.221114.15125.0954
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_44235






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44235.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366428NoneNoneNoneNone
MLOC_44235.2CUST_18040_PI427708080AvailableAvailablecontig_274254 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g43774.1 +2 0.0 784 386/517 (75%) 13101.m04531 protein cytochrome P450 72A1, putative, expressed
TAIR PP10 AT3G14690.1 +2 1e-174 511 254/496 (51%) | Symbols: CYP72A15 | cytochrome P450, family 72, subfamily A, polypeptide 15 | chr3:4937410-4939310 FORWARD LENGTH=512