MLOC_44215 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.78696.427565.368995.5521
LEAShoots from the seedlings (10 cm shoot stage)11.050817.723221.180113.243
INF1Young developing inflorescences (5mm)5.060595.065224.611184.02488
INF2Developing inflorescences (1-1.5 cm)4.7574.86595.057225.15371
ROORoots from the seedlings (10 cm shoot stage)8.110729.918347.7332510.6982
NODDeveloping tillers at six leaf stage, 3rd internode10.748112.428218.892442.4172
CAR5Developing grain, bracts removed (5 DPA)7.976498.048417.354047.30072
CAR15Developing grain, bracts removed (15 DPA)4.369954.322993.501499.47273



CDS Structure of MLOC_44215






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44215.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355618NoneNoneNoneNone
MLOC_44215.2CUST_18039_PI427708080AvailableAvailablecontig_274254 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g48890.1 -2 0.0 679 344/474 (73%) 13107.m05248 protein expressed protein
TAIR PP10 AT3G06560.1 -2 4e-115 363 205/443 (46%) | Symbols: PAPS3 | poly(A) polymerase 3 | chr3:2044443-2047034 FORWARD LENGTH=507