- Predicted Gene MLOC_44214
MLOC_44214 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 14.3923 | 28.7953 | 26.6822 | 24.9051 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 33.374 | 30.7791 | 23.5551 | 25.4709 |
| INF1 | Young developing inflorescences (5mm) | 19.2364 | 18.9731 | 19.952 | 16.0739 |
| INF2 | Developing inflorescences (1-1.5 cm) | 14.8122 | 14.8979 | 14.0633 | 15.7426 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 21.9454 | 39.4989 | 29.0618 | 44.0881 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 21.7956 | 30.2486 | 28.307 | 97.5214 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 8.09088 | 6.77862 | 8.08519 | 7.20045 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.43681 | 2.3922 | 3.33152 | 6.88767 |
CDS Structure of MLOC_44214
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_44214.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g16330.2 |
-3 |
0.0 |
2506 |
1287/1450 (89%) |
13109.m01555 protein pleiotropic drug resistance protein, putative, expressed |
| TAIR PP10 |
AT1G15520.1 |
-3 |
0.0 |
1801 |
910/1447 (63%) |
| Symbols: PDR12, ATPDR12, ABCG40, ATABCG40 | pleiotropic drug resistance 12 | chr1:5331993-5338175 REVERSE LENGTH=1423 |
