MLOC_44213 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains40.328258.269151.298769.2851
LEAShoots from the seedlings (10 cm shoot stage)42.049126.041223.454129.9738
INF1Young developing inflorescences (5mm)181.623167.451135.082164.342
INF2Developing inflorescences (1-1.5 cm)152.832180.313143.363223.495
ROORoots from the seedlings (10 cm shoot stage)14.464834.985428.445353.2256
NODDeveloping tillers at six leaf stage, 3rd internode9.7404114.930820.015170.5848
CAR5Developing grain, bracts removed (5 DPA)73.361274.471167.643592.2633
CAR15Developing grain, bracts removed (15 DPA)14.103912.896613.000737.7254



CDS Structure of MLOC_44213






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44213.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_44213.2CUST_12193_PI427708080AvailableAvailablecontig_274332 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g70020.1 -3 2e-87 278 191/299 (64%) 13101.m07598 protein DEK C terminal domain containing protein, expressed
TAIR PP10 AT5G63550.1 -3 3e-46 168 84/149 (56%) DEK domain-containing chromatin associated protein | chr5:25444805-25447934 FORWARD LENGTH=530