MLOC_44210 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.695315.584725.650224.72291
LEAShoots from the seedlings (10 cm shoot stage)8.9365311.492610.65138.56615
INF1Young developing inflorescences (5mm)6.593996.808548.385385.45287
INF2Developing inflorescences (1-1.5 cm)6.41436.698057.870576.85495
ROORoots from the seedlings (10 cm shoot stage)8.5657112.32629.248713.4434
NODDeveloping tillers at six leaf stage, 3rd internode5.543948.5427111.730830.5604
CAR5Developing grain, bracts removed (5 DPA)2.824122.5642.059642.1968
CAR15Developing grain, bracts removed (15 DPA)1.013690.8523951.245962.01727



CDS Structure of MLOC_44210






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44210.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_44210.2CUST_12192_PI427708080AvailableAvailablecontig_274328 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g26210.1 -3 0.0 786 382/434 (88%) 13107.m02594 protein non-lysosomal glucosylceramidase, putative, expressed
TAIR PP10 AT3G24180.2 -3 0.0 1072 543/779 (70%) Beta-glucosidase, GBA2 type family protein | chr3:8735011-8741147 REVERSE LENGTH=950