MLOC_442 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.496483.889163.133193.44273
LEAShoots from the seedlings (10 cm shoot stage)000.07160250.0580267
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.9090631.60751.312021.68378
NODDeveloping tillers at six leaf stage, 3rd internode0.3404120.39656601.48682
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)7.6043412.10034.4990720.5447



CDS Structure of MLOC_442






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_442.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_442.2CUST_12188_PI427708080AvailableAvailablecontig_10307 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g16839.1 +2 5e-137 400 198/298 (66%) 13102.m01883 protein expansin precursor, putative
TAIR PP10 AT1G20190.1 +2 1e-105 317 149/250 (60%) | Symbols: ATEXPA11, EXP11, ATEXP11, ATHEXP ALPHA 1.14, EXPA11 | expansin 11 | chr1:6998762-6999710 REVERSE LENGTH=252