- Predicted Gene MLOC_44162
MLOC_44162 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 63.0698 | 94.9736 | 100.258 | 83.4057 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 102.769 | 126.958 | 128.095 | 99.885 |
| INF1 | Young developing inflorescences (5mm) | 90.5979 | 91.3206 | 108.915 | 75.9672 |
| INF2 | Developing inflorescences (1-1.5 cm) | 127.722 | 112.929 | 127.111 | 125.862 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 86.9354 | 116.306 | 107.459 | 132.921 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 115.537 | 124.742 | 141.405 | 442.839 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 88.1036 | 85.1602 | 89.1518 | 79.5824 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 46.2631 | 44.8316 | 48.7345 | 98.4694 |
CDS Structure of MLOC_44162
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_44162.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g42710.1 |
-3 |
0.0 |
779 |
411/583 (70%) |
13110.m04017 protein RCD1, putative, expressed |
| TAIR PP10 |
AT1G32230.1 |
-3 |
2e-75 |
259 |
179/589 (30%) |
| Symbols: RCD1, CEO, CEO1, ATP8, AtRCD1 | WWE protein-protein interaction domain protein family | chr1:11613427-11615894 FORWARD LENGTH=589 |