- Predicted Gene MLOC_44161
MLOC_44161 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_44161_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_44161_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 15.9515 | 14.1482 | 14.299 | 14.8236 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 29.8155 | 17.6759 | 19.4466 | 18.9266 |
INF1 | Young developing inflorescences (5mm) | 12.2795 | 10.5616 | 13.3093 | 9.46269 |
INF2 | Developing inflorescences (1-1.5 cm) | 11.5343 | 9.91592 | 11.7911 | 11.1984 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.15977 | 7.24858 | 7.32274 | 7.60582 |
NOD | Developing tillers at six leaf stage, 3rd internode | 12.3628 | 16.0256 | 13.8003 | 42.6741 |
CAR5 | Developing grain, bracts removed (5 DPA) | 14.2627 | 14.2479 | 13.7611 | 12.8254 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.81479 | 2.37714 | 2.42599 | 5.53849 |
CDS Structure of MLOC_44161
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_44161.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g42700.1 |
+1 |
0.0 |
578 |
285/311 (92%) |
13110.m04016 protein CS domain containing protein, putative, expressed |
TAIR PP10 |
AT2G35500.1 |
+1 |
2e-122 |
393 |
194/304 (64%) |
| Symbols: SKL2 | shikimate kinase like 2 | chr2:14914038-14915909 FORWARD LENGTH=387 |