MLOC_44159 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3603691.95382.698610
LEAShoots from the seedlings (10 cm shoot stage)2.021631.893151.128740
INF1Young developing inflorescences (5mm)1.027610.7546161.529970
INF2Developing inflorescences (1-1.5 cm)1.34311.790192.105140
ROORoots from the seedlings (10 cm shoot stage)0.6207931.664594.260280
NODDeveloping tillers at six leaf stage, 3rd internode1.437151.139731.33580
CAR5Developing grain, bracts removed (5 DPA)2.601983.336292.692680
CAR15Developing grain, bracts removed (15 DPA)0.6368070.7956210.6222930



CDS Structure of MLOC_44159






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44159.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357136NoneNoneNoneNone
MLOC_44159.2CUST_18037_PI427708080AvailableNonecontig_274254 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g40920.1 -1 0.0 580 303/409 (74%) 13107.m04258 protein APO, putative, expressed
TAIR PP10 AT5G61930.2 -1 1e-138 441 231/383 (60%) | Symbols: APO3 | Arabidopsis thaliana protein of unknown function (DUF794) | chr5:24866230-24867665 REVERSE LENGTH=402