MLOC_44154 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains581.337459.367468.474544.469
LEAShoots from the seedlings (10 cm shoot stage)259.421167.894167.107181.08
INF1Young developing inflorescences (5mm)936.323866.83944.883855.506
INF2Developing inflorescences (1-1.5 cm)619.77721.332814.606837.002
ROORoots from the seedlings (10 cm shoot stage)467.099505.01787.532695.145
NODDeveloping tillers at six leaf stage, 3rd internode45.17827.436977.1513127.954
CAR5Developing grain, bracts removed (5 DPA)328.463364336.732369.646
CAR15Developing grain, bracts removed (15 DPA)61.954256.664953.7892144.87



CDS Structure of MLOC_44154






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44154.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374140NoneNoneNoneNone
MLOC_44154.1CUST_2623_PI427708080AvailableAvailablecontig_274274 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g43540.1 +1 5e-68 210 117/123 (95%) 13104.m04326 protein ribosomal protein L14, putative, expressed
TAIR PP10 AT2G20450.1 +1 2e-57 182 101/123 (82%) Ribosomal protein L14 | chr2:8813923-8815071 FORWARD LENGTH=134