MLOC_44151 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.573566.193576.665066.69438
LEAShoots from the seedlings (10 cm shoot stage)7.690575.501126.091285.57982
INF1Young developing inflorescences (5mm)16.712617.281516.097413.5017
INF2Developing inflorescences (1-1.5 cm)15.129414.881314.602915.7211
ROORoots from the seedlings (10 cm shoot stage)4.640286.964296.173827.8758
NODDeveloping tillers at six leaf stage, 3rd internode0.6138071.043162.778024.16135
CAR5Developing grain, bracts removed (5 DPA)9.703459.235569.884969.07591
CAR15Developing grain, bracts removed (15 DPA)2.495512.496892.699395.47875



CDS Structure of MLOC_44151






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44151.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_44151.2CUST_6184_PI427708083AvailableAvailablecontig_274271 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g07120.1 +3 4e-142 439 215/231 (93%) 13109.m00554 protein DNA-directed RNA polymerase 1B, mitochondrial precursor, putative, expressed
TAIR PP10 AT1G68990.1 +3 5e-119 376 181/231 (78%) | Symbols: MGP3 | male gametophyte defective 3 | chr1:25935499-25940755 REVERSE LENGTH=976