- Predicted Gene MLOC_44147
MLOC_44147 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_44147_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_44147_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 11.6662 | 68.1935 | 53.1771 | 47.1147 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 60.4967 | 49.9266 | 40.5269 | 43.5251 |
INF1 | Young developing inflorescences (5mm) | 174.041 | 163.298 | 140.39 | 127.759 |
INF2 | Developing inflorescences (1-1.5 cm) | 192.642 | 182.946 | 144.537 | 186.359 |
ROO | Roots from the seedlings (10 cm shoot stage) | 16.9739 | 48.8013 | 33.7204 | 51.627 |
NOD | Developing tillers at six leaf stage, 3rd internode | 13.4352 | 17.8497 | 17.2044 | 62.8556 |
CAR5 | Developing grain, bracts removed (5 DPA) | 98.3804 | 80.6393 | 93.5257 | 83.1023 |
CAR15 | Developing grain, bracts removed (15 DPA) | 33.1825 | 27.6407 | 27.4097 | 63.4618 |
CDS Structure of MLOC_44147
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_44147.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g07050.1 |
+1 |
0.0 |
3393 |
1694/1733 (98%) |
13105.m00763 protein pre-mRNA-processing-splicing factor 8, putative, expressed |
TAIR PP10 |
AT1G80070.1 |
+1 |
0.0 |
3347 |
1665/1733 (96%) |
| Symbols: SUS2, EMB33, EMB177, EMB14 | Pre-mRNA-processing-splicing factor | chr1:30118052-30127574 FORWARD LENGTH=2359 |