- Predicted Gene MLOC_44123
MLOC_44123 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 26.7202 | 16.691 | 16.8553 | 19.9825 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 10.0605 | 6.74441 | 10.5102 | 8.05324 |
| INF1 | Young developing inflorescences (5mm) | 29.3483 | 30.7801 | 31.8298 | 24.8531 |
| INF2 | Developing inflorescences (1-1.5 cm) | 23.4769 | 21.4317 | 20.0667 | 23.6813 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 11.5132 | 13.9548 | 12.5628 | 17.2738 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.825526 | 2.1012 | 7.89233 | 9.72231 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 15.4987 | 15.8553 | 17.7514 | 15.8045 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.86227 | 3.91264 | 2.99189 | 8.31179 |
CDS Structure of MLOC_44123
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_44123.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g16480.1 |
+1 |
2e-47 |
163 |
88/137 (64%) |
13111.m01667 protein transposon protein, putative, unclassified, expressed |
| TAIR PP10 |
AT5G48240.1 |
+1 |
4e-23 |
97 |
59/112 (53%) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 402 Blast hits to 382 proteins in 162 species: Archae - 0; Bacteria - 4; Metazoa - 139; Fungi - 111; Plants - 54; Viruses - 1; Other Eukaryotes - 93 (source: NCBI BLink). | chr5:19559301-19561153 FORWARD LENGTH=309 |