- Predicted Gene MLOC_44109
MLOC_44109 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_44109_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_44109_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0 | 0 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.333738 | 0.408445 | 0.13961 | 0.34711 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.766723 | 1.001 | 0 | 1.45282 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 0 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.14286 | 3.84197 | 2.70375 | 2.85965 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.595975 | 0.127674 | 0.524079 | 0.960415 |
CDS Structure of MLOC_44109
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_44109.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g46130.1 |
-1 |
3e-41 |
147 |
70/80 (88%) |
13102.m05175 protein tRNA synthetases class II domain containing protein, expressed |
TAIR PP10 |
AT4G31180.2 |
-1 |
1e-37 |
136 |
63/80 (79%) |
Class II aminoacyl-tRNA and biotin synthetases superfamily protein | chr4:15156696-15159362 FORWARD LENGTH=558 |