- Predicted Gene MLOC_44090
MLOC_44090 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_44090_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_44090_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 104.352 | 93.588 | 106.331 | 111.255 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 55.392 | 62.6252 | 75.2517 | 60.7044 |
INF1 | Young developing inflorescences (5mm) | 7.65398 | 3.85414 | 4.08322 | 4.79764 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.1718 | 2.6686 | 2.95999 | 3.15948 |
ROO | Roots from the seedlings (10 cm shoot stage) | 105.614 | 85.9253 | 56.3324 | 118.344 |
NOD | Developing tillers at six leaf stage, 3rd internode | 20.1806 | 16.0958 | 10.4497 | 53.8078 |
CAR5 | Developing grain, bracts removed (5 DPA) | 10.2915 | 9.6447 | 10.4899 | 11.2066 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.26317 | 3.53728 | 3.46258 | 9.56773 |
CDS Structure of MLOC_44090
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_44090.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g28200.1 |
+2 |
0.0 |
741 |
353/378 (93%) |
13110.m02388 protein NAD dependent epimerase/dehydratase family protein, putative, expressed |
TAIR PP10 |
AT5G28840.2 |
+2 |
0.0 |
698 |
336/379 (89%) |
| Symbols: GME | GDP-D-mannose 3,5-epimerase | chr5:10862472-10864024 REVERSE LENGTH=377 |