MLOC_44084 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains27.738619.857718.368920.5077
LEAShoots from the seedlings (10 cm shoot stage)13.87665.650845.24436.50459
INF1Young developing inflorescences (5mm)17.112227.44424.376519.8463
INF2Developing inflorescences (1-1.5 cm)13.210116.442916.275816.3899
ROORoots from the seedlings (10 cm shoot stage)45.128239.280145.975841.996
NODDeveloping tillers at six leaf stage, 3rd internode33.384123.196611.158849.8805
CAR5Developing grain, bracts removed (5 DPA)15.190315.322214.579414.2239
CAR15Developing grain, bracts removed (15 DPA)20.371916.976621.461346.8578



CDS Structure of MLOC_44084






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44084.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_44084.1CUST_12170_PI427708080AvailableAvailablecontig_274162 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g30470.1 +1 4e-36 129 63/69 (91%) 13102.m03327 protein expressed protein
TAIR PP10 AT3G48660.1 +1 1e-28 108 50/71 (70%) Protein of unknown function (DUF 3339) | chr3:18029659-18030133 FORWARD LENGTH=89