MLOC_44077 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1680390.314320.2325680.240187
LEAShoots from the seedlings (10 cm shoot stage)0.27565500.07975570.174371
INF1Young developing inflorescences (5mm)0.998291.130470.6775080.765948
INF2Developing inflorescences (1-1.5 cm)0.7527210.9000620.7003070.821884
ROORoots from the seedlings (10 cm shoot stage)0.1923610.2876060.5169950.337607
NODDeveloping tillers at six leaf stage, 3rd internode0.2214770.2448780.5789270.996912
CAR5Developing grain, bracts removed (5 DPA)0.2701550.6418880.3496680.398962
CAR15Developing grain, bracts removed (15 DPA)0.1603530.1683490.07818050.342008



CDS Structure of MLOC_44077






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44077.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_44077.3CUST_6171_PI427708083AvailableAvailablecontig_274135 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g22610.2 -3 3e-119 349 190/239 (79%) 13103.m02725 protein peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed
TAIR PP10 AT5G19830.1 -3 2e-81 251 137/214 (64%) Peptidyl-tRNA hydrolase family protein | chr5:6703383-6705125 FORWARD LENGTH=219