- Predicted Gene MLOC_44077
MLOC_44077 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.168039 | 0.31432 | 0.232568 | 0.240187 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.275655 | 0 | 0.0797557 | 0.174371 |
INF1 | Young developing inflorescences (5mm) | 0.99829 | 1.13047 | 0.677508 | 0.765948 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.752721 | 0.900062 | 0.700307 | 0.821884 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.192361 | 0.287606 | 0.516995 | 0.337607 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.221477 | 0.244878 | 0.578927 | 0.996912 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.270155 | 0.641888 | 0.349668 | 0.398962 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.160353 | 0.168349 | 0.0781805 | 0.342008 |
CDS Structure of MLOC_44077
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_44077.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g22610.2 |
-3 |
3e-119 |
349 |
190/239 (79%) |
13103.m02725 protein peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed |
TAIR PP10 |
AT5G19830.1 |
-3 |
2e-81 |
251 |
137/214 (64%) |
Peptidyl-tRNA hydrolase family protein | chr5:6703383-6705125 FORWARD LENGTH=219 |