MLOC_44076 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)9.272610.93865.418588.54504
CAR15Developing grain, bracts removed (15 DPA)00.034869900.10022



CDS Structure of MLOC_44076






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44076.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373244NoneNoneNoneNone
MLOC_44076.1CUST_2615_PI427708080AvailableAvailablecontig_274135 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g37700.1 +3 9e-137 405 208/399 (52%) 13102.m04125 protein lecithin:cholesterol acyltransferase, putative, expressed
TAIR PP10 AT1G27480.1 +3 5e-72 237 158/416 (38%) alpha/beta-Hydrolases superfamily protein | chr1:9544607-9546168 FORWARD LENGTH=432