- Predicted Gene MLOC_44067
MLOC_44067 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_44067_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_44067_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.0494774 | 1.60982 | 1.28356 | 1.1635 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 139.433 | 53.5073 | 109.772 | 85.274 |
INF1 | Young developing inflorescences (5mm) | 0.184794 | 0.0826394 | 0.233101 | 0.155082 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.282151 | 0.306383 | 0.354371 | 0.358016 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.0886033 | 0.211603 | 3.84428 | 0.700392 |
NOD | Developing tillers at six leaf stage, 3rd internode | 413.142 | 273.611 | 286.668 | 841.462 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.43997 | 6.96834 | 7.23766 | 7.52262 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.268587 | 0.212699 | 0.167392 | 0.545235 |
CDS Structure of MLOC_44067
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_44067.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g52240.1 |
+2 |
6e-171 |
483 |
236/268 (88%) |
13101.m05463 protein chlorophyll A-B binding protein, putative, expressed |
TAIR PP10 |
AT2G34420.1 |
+2 |
6e-163 |
461 |
229/267 (86%) |
| Symbols: LHB1B2, LHCB1.5 | photosystem II light harvesting complex gene B1B2 | chr2:14522716-14523513 REVERSE LENGTH=265 |