MLOC_44059 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.4473413.3311.359511.1017
LEAShoots from the seedlings (10 cm shoot stage)11.00031.507971.705444.17413
INF1Young developing inflorescences (5mm)58.060559.79548.720746.557
INF2Developing inflorescences (1-1.5 cm)74.550772.207865.83877.3192
ROORoots from the seedlings (10 cm shoot stage)5.624338.166939.094499.10051
NODDeveloping tillers at six leaf stage, 3rd internode0.6089471.213820.3568963.47209
CAR5Developing grain, bracts removed (5 DPA)4.918822.540713.403083.37701
CAR15Developing grain, bracts removed (15 DPA)1.566990.6689871.699952.812



CDS Structure of MLOC_44059






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44059.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_44059.1CUST_12163_PI427708080AvailableAvailablecontig_274094 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g05190.1 -3 0.0 1789 939/1044 (90%) 13107.m00469 protein leucine-rich repeat family protein, putative, expressed
TAIR PP10 AT4G20940.1 -3 0.0 840 462/847 (55%) Leucine-rich receptor-like protein kinase family protein | chr4:11202728-11206038 FORWARD LENGTH=977