MLOC_44042 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.700695.511485.916437.57372
LEAShoots from the seedlings (10 cm shoot stage)2.845640.08582110.786811.12586
INF1Young developing inflorescences (5mm)19.530419.456716.45917.9803
INF2Developing inflorescences (1-1.5 cm)15.368917.951514.056620.6856
ROORoots from the seedlings (10 cm shoot stage)2.11093.446964.275095.17847
NODDeveloping tillers at six leaf stage, 3rd internode0.01954180.03484670.01651170.114466
CAR5Developing grain, bracts removed (5 DPA)4.569744.650055.277035.68149
CAR15Developing grain, bracts removed (15 DPA)0.5113780.1309380.6745971.10922



CDS Structure of MLOC_44042






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_44042.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_44042.2CUST_12159_PI427708080AvailableAvailablecontig_273989 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g11400.2 +3 4e-122 365 224/280 (80%) 13103.m01287 protein targeting protein-related, putative, expressed
TAIR PP10 AT3G01015.1 +3 7e-54 192 162/362 (45%) TPX2 (targeting protein for Xklp2) protein family | chr3:1798-4017 REVERSE LENGTH=488