MLOC_4404 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.653242.219561.968111.95722
LEAShoots from the seedlings (10 cm shoot stage)5.647775.616385.23324.50987
INF1Young developing inflorescences (5mm)2.398752.365382.275961.90143
INF2Developing inflorescences (1-1.5 cm)2.018761.994741.910822.12276
ROORoots from the seedlings (10 cm shoot stage)1.232441.755631.715031.87271
NODDeveloping tillers at six leaf stage, 3rd internode3.634492.610224.45498.85606
CAR5Developing grain, bracts removed (5 DPA)1.79151.742141.746881.66029
CAR15Developing grain, bracts removed (15 DPA)0.6256530.6064020.4466841.31052



CDS Structure of MLOC_4404






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_4404.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_4404.1CUST_12158_PI427708080AvailableAvailablecontig_135095 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g67720.1 -3 0.0 632 314/351 (89%) 13101.m07362 protein ABC1 family domain containing protein, putative, expressed
TAIR PP10 AT4G24810.2 -3 8e-153 473 229/351 (65%) Protein kinase superfamily protein | chr4:12786791-12789598 REVERSE LENGTH=481