- Predicted Gene MLOC_44015
MLOC_44015 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 8.89491 | 8.26191 | 13.5429 | 10.4098 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 13.7005 | 8.51074 | 6.03058 | 7.67852 |
INF1 | Young developing inflorescences (5mm) | 15.4217 | 9.92141 | 16.6976 | 12.9305 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.0265 | 3.39931 | 4.57546 | 4.45971 |
ROO | Roots from the seedlings (10 cm shoot stage) | 21.3576 | 10.0383 | 12.8429 | 14.3172 |
NOD | Developing tillers at six leaf stage, 3rd internode | 76.761 | 21.1805 | 105.468 | 105.669 |
CAR5 | Developing grain, bracts removed (5 DPA) | 12.5385 | 9.39756 | 16.7499 | 14.2935 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.80541 | 1.84762 | 1.88933 | 4.83884 |
CDS Structure of MLOC_44015
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_44015.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g01940.1 |
-1 |
4e-15 |
73 |
32/51 (63%) |
13105.m00139 protein zinc finger, RING-type, putative, expressed |
TAIR PP10 | None | - | - | - | - | - |