- Predicted Gene MLOC_43986
MLOC_43986 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_43986_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_43986_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 176.237 | 116.682 | 132.891 | 134.246 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 185.954 | 167.764 | 154.076 | 135.053 |
INF1 | Young developing inflorescences (5mm) | 243.249 | 286.284 | 315.308 | 235.969 |
INF2 | Developing inflorescences (1-1.5 cm) | 629.504 | 346.187 | 598.582 | 548.042 |
ROO | Roots from the seedlings (10 cm shoot stage) | 500.472 | 339.126 | 499.713 | 418.258 |
NOD | Developing tillers at six leaf stage, 3rd internode | 368.527 | 378.226 | 850.668 | 1333.84 |
CAR5 | Developing grain, bracts removed (5 DPA) | 169.998 | 172.798 | 166.535 | 163.589 |
CAR15 | Developing grain, bracts removed (15 DPA) | 324.837 | 302.211 | 319.69 | 757.556 |
CDS Structure of MLOC_43986
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_43986.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g41010.4 |
+3 |
3e-94 |
287 |
140/172 (81%) |
13106.m04278 protein zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed |
TAIR PP10 |
AT1G51200.4 |
+3 |
4e-63 |
206 |
102/176 (58%) |
A20/AN1-like zinc finger family protein | chr1:18985690-18986211 FORWARD LENGTH=173 |