MLOC_43983 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.737110.47910.410410.0546
LEAShoots from the seedlings (10 cm shoot stage)13.34859.451169.944799.20048
INF1Young developing inflorescences (5mm)11.134612.499413.31859.71505
INF2Developing inflorescences (1-1.5 cm)15.502315.690615.647116.503
ROORoots from the seedlings (10 cm shoot stage)11.051711.64759.8254813.0804
NODDeveloping tillers at six leaf stage, 3rd internode13.611513.855513.640145.781
CAR5Developing grain, bracts removed (5 DPA)21.407321.42723.677420.4342
CAR15Developing grain, bracts removed (15 DPA)12.276912.448312.738926.8014



CDS Structure of MLOC_43983






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_43983.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366804NoneNoneNoneNone
MLOC_43983.1CUST_2609_PI427708080AvailableAvailablecontig_273693 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g10600.1 -1 5e-146 432 228/375 (61%) 13102.m01183 protein OsFBA1 - F-box and FBA domain containing protein, expressed
TAIR PP10 AT3G23880.1 -1 4e-14 74 79/345 (23%) F-box and associated interaction domains-containing protein | chr3:8622061-8623155 REVERSE LENGTH=364