MLOC_4396 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.0730070.6591190.3852260.389151
LEAShoots from the seedlings (10 cm shoot stage)0.7496360.6162590.6967540.577288
INF1Young developing inflorescences (5mm)1.137721.110851.226640.895677
INF2Developing inflorescences (1-1.5 cm)1.903761.842562.25411.97292
ROORoots from the seedlings (10 cm shoot stage)0.129490.4179930.1081140.366915
NODDeveloping tillers at six leaf stage, 3rd internode0.2726180.4456140.383411.1964
CAR5Developing grain, bracts removed (5 DPA)0.7413330.3421961.045150.598424
CAR15Developing grain, bracts removed (15 DPA)1.986251.831452.18134.11986



CDS Structure of MLOC_4396






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_4396.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_4396.1CUST_12149_PI427708080AvailableAvailablecontig_135085 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g45420.1 +1 3e-60 215 105/215 (49%) 13111.m04537 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----