- Predicted Gene MLOC_43949
MLOC_43949 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 13.4706 | 25.5478 | 22.7012 | 22.058 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 36.0514 | 107.517 | 52.5558 | 54.9926 |
| INF1 | Young developing inflorescences (5mm) | 16.2891 | 19.1098 | 14.5738 | 14.216 |
| INF2 | Developing inflorescences (1-1.5 cm) | 7.1752 | 8.2263 | 6.60087 | 8.0296 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.26377 | 5.51817 | 4.70051 | 6.11464 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 12.3456 | 9.59355 | 6.90862 | 32.1506 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 40.1407 | 72.5017 | 84.3576 | 62.1506 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 17.6928 | 21.9845 | 19.2118 | 43.984 |
CDS Structure of MLOC_43949
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_43949.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g47610.8 |
+3 |
0.0 |
1201 |
595/643 (93%) |
13103.m05130 protein thiamine biosynthesis protein thiC, putative, expressed |
| TAIR PP10 |
AT2G29630.3 |
+3 |
0.0 |
1055 |
514/619 (83%) |
| Symbols: THIC | thiaminC | chr2:12667395-12669569 FORWARD LENGTH=644 |