MLOC_43885 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains32.914160.465161.168358.7537
LEAShoots from the seedlings (10 cm shoot stage)61.540523.266318.281331.2816
INF1Young developing inflorescences (5mm)42.056643.461641.870337.3311
INF2Developing inflorescences (1-1.5 cm)41.239738.045535.334845.0832
ROORoots from the seedlings (10 cm shoot stage)16.442535.68124.045943.4215
NODDeveloping tillers at six leaf stage, 3rd internode195.388229.592150.557811.143
CAR5Developing grain, bracts removed (5 DPA)58.965958.409360.797162.9489
CAR15Developing grain, bracts removed (15 DPA)6.948766.721538.0820217.1982



CDS Structure of MLOC_43885






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_43885.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361226NoneNoneNoneNone
MLOC_43885.1CUST_18032_PI427708080AvailableAvailablecontig_273247 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g14250.1 -3 0.0 1529 851/1049 (81%) 13103.m01666 protein plant protein of unknown function DUF869 domain containing protein, expressed
TAIR PP10 AT1G19835.2 -3 0.0 746 481/1058 (45%) Plant protein of unknown function (DUF869) | chr1:6856212-6859513 REVERSE LENGTH=982