- Predicted Gene MLOC_43828
MLOC_43828 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 102.582 | 77.1854 | 86.5711 | 86.7822 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 72.5208 | 55.9001 | 66.7926 | 56.5578 |
| INF1 | Young developing inflorescences (5mm) | 64.575 | 79.5 | 83.2318 | 63.1673 |
| INF2 | Developing inflorescences (1-1.5 cm) | 90.429 | 85.9661 | 88.6389 | 97.4395 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 102.024 | 88.3187 | 88.8805 | 114.53 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 111.471 | 101.77 | 116.288 | 348.196 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 64.324 | 63.5055 | 60.5281 | 62.7955 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 19.3664 | 18.3248 | 19.4878 | 45.6888 |
CDS Structure of MLOC_43828
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_43828.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g13530.1 |
+1 |
9e-111 |
326 |
189/201 (94%) |
13107.m01406 protein ras-related protein, putative, expressed |
| TAIR PP10 |
AT3G46060.3 |
+1 |
2e-104 |
309 |
178/202 (88%) |
| Symbols: ARA3 | RAB GTPase homolog 8A | chr3:16917908-16919740 FORWARD LENGTH=216 |