MLOC_43806 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.5470980.2661040.9175190.592499
LEAShoots from the seedlings (10 cm shoot stage)0.653620.9132340.4922460.6734
INF1Young developing inflorescences (5mm)0.930240.2555560.3742110.487844
INF2Developing inflorescences (1-1.5 cm)0.03864970.03640240.04725680.0512301
ROORoots from the seedlings (10 cm shoot stage)3.906871.337042.021792.33931
NODDeveloping tillers at six leaf stage, 3rd internode3.730831.726890.06637434.38822
CAR5Developing grain, bracts removed (5 DPA)0.18147100.04436080.152218
CAR15Developing grain, bracts removed (15 DPA)0.0670588000.239521



CDS Structure of MLOC_43806






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_43806.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360318NoneNoneNoneNone
MLOC_43806.1CUST_2601_PI427708080AvailableAvailablecontig_272798 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g41510.1 +2 2e-110 325 180/262 (69%) 13102.m04580 protein MYB family transcription factor, putative, expressed
TAIR PP10 AT3G23250.1 +2 5e-77 240 141/288 (49%) | Symbols: MYB15, ATY19, ATMYB15 | myb domain protein 15 | chr3:8309492-8310624 FORWARD LENGTH=285