MLOC_4380 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 12.195 | 15.1605 | 14.7058 | 14.1394 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 18.5514 | 19.243 | 25.1257 | 16.7081 |
| INF1 | Young developing inflorescences (5mm) | 20.2745 | 22.6708 | 22.6938 | 18.3329 |
| INF2 | Developing inflorescences (1-1.5 cm) | 14.7299 | 18.3982 | 18.1926 | 18.2981 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 10.9162 | 15.2902 | 10.512 | 15.5984 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 8.04724 | 12.7549 | 12.0891 | 35.5954 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 11.5961 | 10.5213 | 10.4254 | 10.2923 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.14114 | 2.56323 | 2.70273 | 6.61516 |
CDS Structure of MLOC_4380
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4380.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g37100.1 |
-2 |
0.0 |
1449 |
707/861 (82%) |
13109.m03673 protein phospholipase D, putative, expressed |
| TAIR PP10 |
AT4G35790.2 |
-2 |
0.0 |
1105 |
553/863 (64%) |
| Symbols: ATPLDDELTA, PLDDELTA | phospholipase D delta | chr4:16955774-16959875 REVERSE LENGTH=857 |
