- Predicted Gene MLOC_43743
MLOC_43743 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_43743_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_43743_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 12.2217 | 10.3762 | 9.72849 | 11.1845 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 6.2811 | 7.04789 | 7.00155 | 5.8799 |
INF1 | Young developing inflorescences (5mm) | 28.789 | 30.0096 | 26.4182 | 25.0279 |
INF2 | Developing inflorescences (1-1.5 cm) | 24.6138 | 19.8946 | 19.5839 | 24.9818 |
ROO | Roots from the seedlings (10 cm shoot stage) | 7.94252 | 12.9372 | 12.7287 | 15.3924 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.619044 | 0.794843 | 2.84934 | 4.05503 |
CAR5 | Developing grain, bracts removed (5 DPA) | 12.4849 | 13.2122 | 12.7318 | 13.5253 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.40973 | 2.33146 | 2.31038 | 5.82175 |
CDS Structure of MLOC_43743
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_43743.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g43922.1 |
-2 |
0.0 |
521 |
274/315 (87%) |
13104.m04372 protein exosome complex exonuclease rrp4, putative, expressed |
TAIR PP10 |
AT1G03360.1 |
-2 |
2e-136 |
399 |
207/314 (66%) |
| Symbols: ATRRP4, RRP4 | ribosomal RNA processing 4 | chr1:824653-826179 FORWARD LENGTH=322 |