MLOC_4373 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.55751000.0213889
LEAShoots from the seedlings (10 cm shoot stage)0.026246000.0108044
INF1Young developing inflorescences (5mm)0.1346930.2072940.2470330.217064
INF2Developing inflorescences (1-1.5 cm)8.494240.5041286.84926.18119
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode00.006843580.03150860.0232854
CAR5Developing grain, bracts removed (5 DPA)0.5706780.8981681.163721.23014
CAR15Developing grain, bracts removed (15 DPA)0.04351360.1111880.08687870.236226



CDS Structure of MLOC_4373






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_4373.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_4373.1CUST_12124_PI427708080AvailableAvailablecontig_135063 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g33420.1 -3 0.0 863 423/641 (66%) 13101.m03369 protein glycosyl hydrolase family protein 27, putative, expressed
TAIR PP10 AT3G26380.1 -3 0.0 637 315/613 (51%) Melibiase family protein | chr3:9660140-9663145 FORWARD LENGTH=647