- Predicted Gene MLOC_43721
MLOC_43721 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_43721_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_43721_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 72.6369 | 109.215 | 95.0248 | 86.3872 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 63.4199 | 8.78362 | 3.07048 | 23.2423 |
INF1 | Young developing inflorescences (5mm) | 453.996 | 445.522 | 446.297 | 327.476 |
INF2 | Developing inflorescences (1-1.5 cm) | 357.037 | 557.748 | 382.517 | 454.055 |
ROO | Roots from the seedlings (10 cm shoot stage) | 14.6076 | 52.8911 | 52.0172 | 50.2062 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 1.22715 | 0.094132 | 5.13881 |
CAR5 | Developing grain, bracts removed (5 DPA) | 115.487 | 102.838 | 102.503 | 91.6818 |
CAR15 | Developing grain, bracts removed (15 DPA) | 9.28475 | 6.2146 | 10.2721 | 17.1449 |
CDS Structure of MLOC_43721
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_43721.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g47150.1 |
+2 |
1e-25 |
102 |
48/77 (62%) |
13102.m05304 protein DNA topoisomerase 2, putative, expressed |
TAIR PP10 |
AT3G23890.2 |
+2 |
2e-22 |
92 |
41/71 (58%) |
| Symbols: TOPII, ATTOPII | topoisomerase II | chr3:8624931-8631106 FORWARD LENGTH=1438 |