MLOC_43717 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.203827.70596.772645.81684
LEAShoots from the seedlings (10 cm shoot stage)6.007423.415093.04283.65636
INF1Young developing inflorescences (5mm)10.69468.573238.368137.33703
INF2Developing inflorescences (1-1.5 cm)13.48329.9150710.023511.9665
ROORoots from the seedlings (10 cm shoot stage)1.114223.314262.840243.6022
NODDeveloping tillers at six leaf stage, 3rd internode2.733513.903862.8392212.7646
CAR5Developing grain, bracts removed (5 DPA)11.976811.156313.928611.7216
CAR15Developing grain, bracts removed (15 DPA)11.454210.059711.867123.329



CDS Structure of MLOC_43717






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_43717.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_43717.1CUST_12123_PI427708080AvailableAvailablecontig_272286 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g12876.1 -3 0.0 1192 745/986 (76%) 13106.m01417 protein expressed protein
TAIR PP10None-----