MLOC_43611 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains21.885810.763812.347111.8548
LEAShoots from the seedlings (10 cm shoot stage)22.700518.896627.608915.7605
INF1Young developing inflorescences (5mm)15.509616.46316.477710.3817
INF2Developing inflorescences (1-1.5 cm)14.764813.447318.462812.4354
ROORoots from the seedlings (10 cm shoot stage)36.410814.312122.264317.9516
NODDeveloping tillers at six leaf stage, 3rd internode11.819514.043224.106838.0224
CAR5Developing grain, bracts removed (5 DPA)12.343612.78913.59878.88316
CAR15Developing grain, bracts removed (15 DPA)5.035464.182664.888288.09617



CDS Structure of MLOC_43611






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_43611.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_43611.1CUST_12433_PI427708083AvailableAvailablecontig_271630 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g10440.1 -2 1e-14 71 49/56 (88%) 13106.m01132 protein gb protein, putative, expressed
TAIR PP10None-----