MLOC_43583 FPKM values

FPKM by Treatment	FPKM by Replicate

Treatment ID	Treatment Description	Rep 1 FPKM	Rep 2 FPKM	Rep 3 FPKM	Treatment FPKM
EMB	4-day embryos dissected from germinating grains	0.0179636	0.119514	0	0.0965278
LEA	Shoots from the seedlings (10 cm shoot stage)	0	0.0318777	0.058635	0.0485234
INF1	Young developing inflorescences (5mm)	0.0297963	0.049009	0	0.035671
INF2	Developing inflorescences (1-1.5 cm)	0	0.0137028	0	0.019328
ROO	Roots from the seedlings (10 cm shoot stage)	0	0.0200908	0.101785	0.0408578
NOD	Developing tillers at six leaf stage, 3rd internode	0.0129576	0	0.0101269	0.011275
CAR5	Developing grain, bracts removed (5 DPA)	19.3837	22.3011	20.1715	18.1266
CAR15	Developing grain, bracts removed (15 DPA)	142.5	144.609	150.469	319.005

CDS Structure of MLOC_43583

Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_43583.1

Cluster member	Probe ID	FPKM by replicate	FPKM by treatment	Source Contig
AK372730	None	None	None	None
MLOC_43583.1	CUST_227_PI427708083	Available	Available	contig_271470 (Mapped)

Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

Database	Hit	Frame	E-value	Score	% Identity	Description
Rice PP6	LOC_Os11g22280.1	+1	7e-33	133	72/174 (41%)	13111.m02153 protein retrotransposon protein, putative, unclassified
TAIR PP10	AT5G48050.1	+1	8e-26	111	52/172 (30%)	CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:19472661-19473770 REVERSE LENGTH=369