MLOC_43580 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.442163.231834.839273.57736
LEAShoots from the seedlings (10 cm shoot stage)4.124573.275455.394373.33951
INF1Young developing inflorescences (5mm)9.3723313.708115.01228.38471
INF2Developing inflorescences (1-1.5 cm)12.764114.90411.991813.1101
ROORoots from the seedlings (10 cm shoot stage)1.051982.98183.066462.84118
NODDeveloping tillers at six leaf stage, 3rd internode1.834154.459654.3597912.8086
CAR5Developing grain, bracts removed (5 DPA)4.186393.646783.59333.32982
CAR15Developing grain, bracts removed (15 DPA)0.7982460.2318121.179971.33894



CDS Structure of MLOC_43580






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_43580.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_43580.1CUST_12431_PI427708083AvailableAvailablecontig_271459 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g10190.1 +1 1e-26 108 58/95 (61%) 13110.m00915 protein ATP-binding region, ATPase-like domain containing protein, expressed
TAIR PP10None-----