- Predicted Gene MLOC_43557
MLOC_43557 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.33748 | 6.15463 | 5.1225 | 4.71018 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 9.56513 | 9.21251 | 6.94172 | 7.26751 |
| INF1 | Young developing inflorescences (5mm) | 3.48781 | 5.36014 | 5.92788 | 3.91905 |
| INF2 | Developing inflorescences (1-1.5 cm) | 9.4699 | 6.54443 | 6.23831 | 7.96427 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.08885 | 3.53619 | 9.80639 | 4.90602 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 6.15149 | 9.80564 | 9.84122 | 31.0006 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 8.18311 | 7.41338 | 6.14496 | 6.59841 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 71.3398 | 54.0763 | 69.6818 | 142.245 |
CDS Structure of MLOC_43557
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_43557.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g03660.1 |
+1 |
1e-45 |
105 |
47/58 (81%) |
13103.m00359 protein CAMK_CAMK_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
| TAIR PP10 |
AT4G35310.1 |
+1 |
2e-40 |
97 |
43/58 (74%) |
| Symbols: CPK5, ATCPK5 | calmodulin-domain protein kinase 5 | chr4:16802436-16804628 FORWARD LENGTH=556 |