- Predicted Gene MLOC_43556
MLOC_43556 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_43556_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_43556_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 18.9675 | 19.0013 | 18.9183 | 19.8813 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 24.4316 | 32.6904 | 30.6505 | 24.9953 |
INF1 | Young developing inflorescences (5mm) | 10.9403 | 12.6298 | 14.9908 | 11.6198 |
INF2 | Developing inflorescences (1-1.5 cm) | 14.5259 | 14.0456 | 15.1472 | 16.77 |
ROO | Roots from the seedlings (10 cm shoot stage) | 34.8191 | 32.6251 | 35.5535 | 40.7409 |
NOD | Developing tillers at six leaf stage, 3rd internode | 46.2832 | 62.3002 | 92.8475 | 213.142 |
CAR5 | Developing grain, bracts removed (5 DPA) | 16.9058 | 19.0848 | 18.2663 | 19.0927 |
CAR15 | Developing grain, bracts removed (15 DPA) | 23.1026 | 20.1882 | 16.9276 | 52.8362 |
CDS Structure of MLOC_43556
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_43556.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g71980.1 |
-2 |
1e-156 |
445 |
214/255 (84%) |
13101.m07841 protein rho-GTPase-activating protein-like, putative, expressed |
TAIR PP10 |
AT3G10210.1 |
-2 |
1e-103 |
309 |
144/232 (62%) |
SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein | chr3:3160416-3161579 REVERSE LENGTH=237 |