MLOC_43530 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.656916.317610.34760
LEAShoots from the seedlings (10 cm shoot stage)3.546250.92319400
INF1Young developing inflorescences (5mm)76.249973.742690.41240
INF2Developing inflorescences (1-1.5 cm)47.7172149.95391.97890
ROORoots from the seedlings (10 cm shoot stage)04.946542.428210
NODDeveloping tillers at six leaf stage, 3rd internode0.419321.0530.2687340
CAR5Developing grain, bracts removed (5 DPA)29.845412.932413.96610
CAR15Developing grain, bracts removed (15 DPA)5.558972.481774.16670



CDS Structure of MLOC_43530






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK373790
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373790CUST_22559_PI427708080NoneNoneNone
MLOC_37058.1NoneAvailableNonecontig_2547718 (Mapped)
MLOC_43530.2NoneAvailableNonecontig_271112 (Mapped)
MLOC_46408.1NoneAvailableNonecontig_289829 (Mapped)
MLOC_51380.3NoneAvailableAvailablecontig_369081 (Mapped)
MLOC_52067.1NoneAvailableNonecontig_37264 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----