- Predicted Gene MLOC_43526
MLOC_43526 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.80185 | 4.47392 | 4.1109 | 4.54817 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 38.3665 | 104.245 | 167.115 | 82.1396 |
| INF1 | Young developing inflorescences (5mm) | 4.60988 | 1.32246 | 0.772535 | 1.95752 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.215977 | 0.0260455 | 0.677543 | 0.288735 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 14.9987 | 6.93284 | 12.0044 | 9.66543 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 83.772 | 34.1114 | 44.7315 | 89.7374 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.927337 | 0.182352 | 0 | 0.54348 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.326386 | 0.137196 | 0.0674746 | 0.506965 |
CDS Structure of MLOC_43526
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_43526.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g05680.1 |
+3 |
0.0 |
550 |
267/310 (86%) |
13105.m00599 protein 1-aminocyclopropane-1-carboxylate oxidase, putative, expressed |
| TAIR PP10 |
AT1G77330.1 |
+3 |
2e-133 |
392 |
197/313 (63%) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:29063215-29064447 REVERSE LENGTH=307 |