MLOC_4350 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_4350_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_4350_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 11.4733 | 16.0106 | 15.8896 | 11.8502 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 15.2963 | 9.02698 | 6.81359 | 7.94532 |
INF1 | Young developing inflorescences (5mm) | 46.7521 | 46.9338 | 45.3825 | 31.0939 |
INF2 | Developing inflorescences (1-1.5 cm) | 35.2079 | 37.2898 | 37.0673 | 33.1413 |
ROO | Roots from the seedlings (10 cm shoot stage) | 6.59379 | 13.8504 | 11.3217 | 11.9206 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.16556 | 4.23777 | 9.68782 | 15.0308 |
CAR5 | Developing grain, bracts removed (5 DPA) | 19.369 | 16.5484 | 18.9183 | 14.3171 |
CAR15 | Developing grain, bracts removed (15 DPA) | 7.48325 | 6.1288 | 6.05746 | 12.2497 |
CDS Structure of MLOC_4350
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4350.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g18010.1 |
+1 |
0.0 |
699 |
356/451 (79%) |
13104.m01643 protein cleavage and polyadenylation specificity factor subunit 1, putative, expressed |
TAIR PP10 |
AT5G51660.1 |
+1 |
0.0 |
1061 |
556/852 (65%) |
| Symbols: CPSF160, ATCPSF160 | cleavage and polyadenylation specificity factor 160 | chr5:20980250-20989268 FORWARD LENGTH=1442 |