- Predicted Gene MLOC_43498
MLOC_43498 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_43498_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_43498_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 16.4267 | 12.7134 | 13.865 | 15.4438 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.77261 | 1.72347 | 1.23015 | 1.45072 |
INF1 | Young developing inflorescences (5mm) | 0 | 0.0293164 | 0 | 0.0374258 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0.0245736 | 0.0328419 | 0.0736588 |
ROO | Roots from the seedlings (10 cm shoot stage) | 7.52909 | 10.1129 | 7.17127 | 13.0881 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.10794 | 2.90232 | 3.65169 | 10.8195 |
CAR5 | Developing grain, bracts removed (5 DPA) | 9.32379 | 9.00001 | 10.4691 | 11.014 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.20212 | 4.15308 | 3.66369 | 11.0724 |
CDS Structure of MLOC_43498
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_43498.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g44980.1 |
-3 |
4e-156 |
449 |
221/301 (73%) |
13104.m04501 protein short-chain dehydrogenase/reductase, putative, expressed |
TAIR PP10 |
AT1G01800.1 |
-3 |
2e-80 |
253 |
138/300 (46%) |
NAD(P)-binding Rossmann-fold superfamily protein | chr1:293396-294888 FORWARD LENGTH=295 |