- Predicted Gene MLOC_43486
MLOC_43486 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 46.3773 | 32.3929 | 34.3383 | 36.0042 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 16.0296 | 16.2574 | 20.9317 | 14.2366 |
| INF1 | Young developing inflorescences (5mm) | 5.89889 | 7.08346 | 6.51914 | 5.55707 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.42489 | 4.87682 | 5.52296 | 5.03784 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 28.7251 | 27.9626 | 24.1043 | 31.5204 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 10.6035 | 12.9121 | 11.1991 | 38.7297 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 13.9405 | 16.6386 | 15.0399 | 15.2483 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.48629 | 1.94301 | 1.4023 | 3.97673 |
CDS Structure of MLOC_43486
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_43486.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g38200.1 |
+1 |
0.0 |
605 |
322/371 (87%) |
13102.m04201 protein dehydrogenase, putative, expressed |
| TAIR PP10 |
AT4G35260.1 |
+1 |
0.0 |
583 |
309/365 (85%) |
| Symbols: IDH1, IDH-I | isocitrate dehydrogenase 1 | chr4:16774494-16776233 REVERSE LENGTH=367 |