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MLOC_43458 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.294129.477664.112640
LEAShoots from the seedlings (10 cm shoot stage)4.159311.833936.205040
INF1Young developing inflorescences (5mm)13.777912.506512.49850
INF2Developing inflorescences (1-1.5 cm)21.833827.146929.92690
ROORoots from the seedlings (10 cm shoot stage)1.300638.091583.396190
NODDeveloping tillers at six leaf stage, 3rd internode5.017928.210196.204230
CAR5Developing grain, bracts removed (5 DPA)15.476118.255815.67120
CAR15Developing grain, bracts removed (15 DPA)4.788395.720266.537770



CDS Structure of MLOC_43458






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK364404
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364404CUST_13716_PI427708083NoneNoneNone
MLOC_1185.1NoneAvailableNonecontig_110239 (Mapped)
MLOC_26913.1NoneAvailableNonecontig_1789633 (Mapped)
MLOC_29435.1NoneAvailableNonecontig_200588 (Mapped)
MLOC_30927.1NoneAvailableNonecontig_2140383 (Not mapped)
MLOC_31022.1NoneAvailableAvailablecontig_214990 (Not mapped)
MLOC_31598.1NoneAvailableNonecontig_2204010 (Mapped)
MLOC_32861.1NoneAvailableNonecontig_232528 (Mapped)
MLOC_43458.2NoneAvailableNonecontig_270487 (Mapped)
MLOC_48327.1NoneAvailableNonecontig_32140 (Not mapped)
MLOC_55409.1NoneAvailableNonecontig_399404 (Not mapped)
MLOC_678.1NoneAvailableNonecontig_1049757 (Not mapped)
MLOC_74634.1NoneAvailableNonecontig_662344 (Not mapped)
MLOC_78888.1NoneAvailableNonecontig_823280 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----