MLOC_4344 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.47831 | 2.99389 | 2.40788 | 2.42145 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 3.1506 | 2.1389 | 1.16854 | 1.82008 |
| INF1 | Young developing inflorescences (5mm) | 2.00215 | 2.92719 | 1.83489 | 1.85406 |
| INF2 | Developing inflorescences (1-1.5 cm) | 5.08545 | 4.83766 | 4.20843 | 5.01801 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.74316 | 6.08673 | 5.08601 | 6.46685 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 10.3608 | 9.01184 | 7.35056 | 28.6266 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.12238 | 2.01634 | 2.04981 | 1.94765 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.285991 | 0.307063 | 0.220652 | 0.611903 |
CDS Structure of MLOC_4344
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4344.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g27430.1 |
-2 |
0.0 |
775 |
505/999 (51%) |
13111.m02628 protein NB-ARC domain containing protein |
| TAIR PP10 |
AT3G46530.1 |
-2 |
9e-38 |
154 |
175/676 (26%) |
| Symbols: RPP13 | NB-ARC domain-containing disease resistance protein | chr3:17130739-17133246 REVERSE LENGTH=835 |
