MLOC_43417 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.361432.833730.56950
LEAShoots from the seedlings (10 cm shoot stage)28.170627.834821.05070
INF1Young developing inflorescences (5mm)30.107232.19927.45670
INF2Developing inflorescences (1-1.5 cm)26.710226.036122.10970
ROORoots from the seedlings (10 cm shoot stage)17.561321.784617.65020
NODDeveloping tillers at six leaf stage, 3rd internode12.548410.71511.98360
CAR5Developing grain, bracts removed (5 DPA)22.371621.091119.39430
CAR15Developing grain, bracts removed (15 DPA)6.102495.452793.830960



CDS Structure of MLOC_43417






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK368050
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368050CUST_21575_PI427708080NoneNoneNone
MLOC_19304.2NoneAvailableAvailablecontig_158437 (Mapped)
MLOC_43417.2NoneAvailableNonecontig_270190 (Mapped)
MLOC_74756.2NoneAvailableNonecontig_6648 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----